Report Type: Expression Report Date: 01:40PM 04/30/2004 ______________________________________________________________________ Filename: C4-2_3.CHP Probe Array Type: HG-U133_Plus_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.200 Scale Factor (SF): 3.683 TGT Value: 250 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 36.16 Std: 0.41 Min: 35.40 Max: 37.50 Noise: Avg: 1.95 Std: 0.08 Min: 1.80 Max: 2.20 Corner+ Avg: 135 Count: 32 Corner- Avg: 13215 Count: 32 Central- Avg: 14155 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 54675 Number Present: 22412 41.0% Number Absent: 31519 57.6% Number Marginal: 744 1.4% Average Signal (P): 1003.6 Average Signal (A): 24.4 Average Signal (M): 74.9 Average Signal (All): 426.5 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-HUMISGF3A/M97935 167.0 P 272.4 P 601.9 P 347.12 3.60 AFFX-HUMRGE/M10098 430.6 P 428.4 P 433.0 P 430.65 1.01 AFFX-HUMGAPDH/M33197 21994.4 P 21759.7 P 20216.5 P 21323.51 0.92 AFFX-HSAC07/X00351 5829.2 P 7882.5 P 11667.2 P 8459.62 2.00 AFFX-M27830 1101.3 P 2695.1 P 13.2 A 1269.86 0.01 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 724.0 P 1268.9 P 658.7 P 883.90 0.91 AFFX-BIOC 1484.9 P 1518.8 P 1501.81 1.02 AFFX-BIOD 2138.9 P 6896.3 P 4517.64 3.22 AFFX-CRE 17703.9 P 23530.4 P 20617.17 1.33 AFFX-DAP 2232.9 P 3513.3 P 4402.6 P 3382.94 1.97 AFFX-LYS 411.4 P 435.2 P 1109.3 P 651.94 2.70 AFFX-PHE 658.1 P 649.3 P 463.7 P 590.33 0.70 AFFX-THR 480.5 P 712.3 P 984.4 P 725.70 2.05 AFFX-TRP 4.7 A 7.8 A 1.6 A 4.67 0.34 AFFX-R2-EC-BIOB 990.1 P 1396.4 P 919.0 P 1101.86 0.93 AFFX-R2-EC-BIOC 1939.0 P 2642.9 P 2290.96 1.36 AFFX-R2-EC-BIOD 7790.5 P 9121.0 P 8455.76 1.17 AFFX-R2-P1-CRE 36234.6 P 34964.8 P 35599.70 0.96 AFFX-R2-BS-DAP 3749.9 P 3991.0 P 4539.7 P 4093.51 1.21 AFFX-R2-BS-LYS 593.2 P 487.4 P 388.4 P 489.67 0.65 AFFX-R2-BS-PHE 1024.9 P 712.1 P 969.7 P 902.24 0.95 AFFX-R2-BS-THR 794.4 P 995.7 P 1242.0 P 1010.67 1.56 ______________________________________________________________________