Report Type: Expression Report Date: 01:40PM 04/30/2004 ______________________________________________________________________ Filename: C4-2_2B.CHP Probe Array Type: HG-U133_Plus_2 Algorithm: Statistical Probe Pair Thr: 8 Controls: Antisense ______________________________________________________________________ Alpha1: 0.05 Alpha2: 0.065 Tau: 0.015 Noise (RawQ): 1.590 Scale Factor (SF): 2.641 TGT Value: 250 Norm Factor (NF): 1.000 ______________________________________________________________________ Background: Avg: 50.31 Std: 0.87 Min: 47.90 Max: 52.70 Noise: Avg: 3.13 Std: 0.12 Min: 2.90 Max: 3.50 Corner+ Avg: 163 Count: 32 Corner- Avg: 14315 Count: 32 Central- Avg: 15148 Count: 9 ______________________________________________________________________ The following data represents probe sets that exceed the probe pair threshold and are not called "No Call". Total Probe Sets: 54675 Number Present: 22081 40.4% Number Absent: 31930 58.4% Number Marginal: 664 1.2% Average Signal (P): 985.5 Average Signal (A): 24.3 Average Signal (M): 78.1 Average Signal (All): 413.1 ______________________________________________________________________ Housekeeping Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-HUMISGF3A/M97935 160.1 P 243.4 P 639.8 P 347.75 4.00 AFFX-HUMRGE/M10098 446.7 P 375.2 P 387.4 P 403.08 0.87 AFFX-HUMGAPDH/M33197 18351.0 P 17242.9 P 18620.3 P 18071.41 1.01 AFFX-HSAC07/X00351 5819.9 P 7202.7 P 10559.7 P 7860.75 1.81 AFFX-M27830 1050.4 P 3075.4 P 13.2 A 1379.66 0.01 ______________________________________________________________________ Spike Controls: Probe Set Sig(5') Det(5') Sig(M') Det(M') Sig(3') Det(3') Sig(all) Sig(3'/5') AFFX-BIOB 491.0 P 754.7 P 422.6 P 556.10 0.86 AFFX-BIOC 1230.5 P 1165.2 P 1197.84 0.95 AFFX-BIOD 1485.5 P 5080.8 P 3283.14 3.42 AFFX-CRE 13811.7 P 17465.3 P 15638.49 1.26 AFFX-DAP 1883.2 P 3099.2 P 3300.2 P 2760.89 1.75 AFFX-LYS 297.1 P 369.9 P 699.6 P 455.54 2.35 AFFX-PHE 466.9 P 525.7 P 344.8 P 445.81 0.74 AFFX-THR 437.8 P 609.6 P 744.0 P 597.14 1.70 AFFX-TRP 34.4 A 2.4 A 5.6 A 14.13 0.16 AFFX-R2-EC-BIOB 585.3 P 938.8 P 663.0 P 729.04 1.13 AFFX-R2-EC-BIOC 1407.6 P 1931.5 P 1669.56 1.37 AFFX-R2-EC-BIOD 5817.7 P 6770.6 P 6294.15 1.16 AFFX-R2-P1-CRE 24718.5 P 23497.5 P 24108.03 0.95 AFFX-R2-BS-DAP 2877.9 P 3271.4 P 3867.2 P 3338.83 1.34 AFFX-R2-BS-LYS 460.2 P 384.6 P 349.0 P 397.95 0.76 AFFX-R2-BS-PHE 744.1 P 604.0 P 723.1 P 690.37 0.97 AFFX-R2-BS-THR 588.6 P 759.1 P 900.0 P 749.25 1.53 ______________________________________________________________________